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Publications

Pubmed list

  1. Herre E. A., Jander C., Machado C. A. (2008) Evolutionary ecology of figs and their associates: ongoing progress and outstanding puzzles. Annu. Rev. Ecol. Evol. Syst. (in press)

  2. Schaeffer S. W. et al. (2008) Polytene Chromosomal Maps of 11 Drosophila species: The order of genomic scaffolds inferred from genetic and physical maps. Genetics 179: 1601-1655 ""

  3. Jackson A. P., Machado C. A., Robbins N., Herre E. A. (2008) Multi-locus phylogenetic analysis of neotropical figs does not support co-speciation with the pollinators: the importance of systematic scale in fig/wasp cophylogenetic studies. Symbiosis 45: 57-72 ""

  4. Noor M. A. F., Garfield D. A., Schaeffer S. W., Machado C. A. (2007) Divergence between the Drosophila pseudoobscura and D. persimilis genome sequences with respect to their inversions. Genetics 177: 1417-1428 ""

  5. Drosophila 12 Genome Consortium (2007) Evolution of genes and genomes on the Drosophila phylogeny. Nature 450: 203-218 ""

  6. Machado C. A., Matzkin L. M., Reed L., Markow T. A. (2007) Multilocus nuclear sequences reveal intra and interspecific relationships among chromosomally polymorphic species of cactophilic Drosophila. Mol. Ecol.16: 3009-3024 ""

  7. Machado C. A., Haselkorn T. S., Noor M. A. F. (2007) Evaluation of the genomic extent of effects of fixed inversion differences on intraspecific variation and interspecific introgression in Drosophila pseudoobscura and D. persimilis. Genetics 175: 1289-1306 ""

  8. Marussich W., Machado C. A. (2007) Host-specificity and coevolution among pollinating and non-pollinating New World fig wasps. Mol. Ecol. 16: 1925-1946 ""

  9. Vuissoz A., Worobey M., Odegaard N., Bunce M., Machado C. A., Lynnerup N., Peacock E., Gilbert M. T. P. (2007) The survival of PCR-amplifiable DNA in cow leather. J. Arch. Sci. 34: 823-829 ""

  10. Matzkin L. M., Watts T. D., Bitler B. G., Machado C. A., Markow T. A. (2006) Functional genomics of cactus host shifts in Drosophila mojavensis. Mol. Ecol. 15: 4635-4643 ""

  11. Ranz, J. M., Machado C. A. (2006) Uncovering evolutionary patterns of gene expression using microarrays Trends Ecol. Evol. 21: 29-37 ""

  12. Rønsted N., Weiblen G. D., Cook J. M., Salamin N., Machado C. A., Savolainen V. (2005) 60 million years of codivergence in the fig-wasp symbiosis Proc. Biol. Sci. 272: 2593-2599""

  13. Machado, C. A., Robbins, N., Gilbert, M. P. T., Herre E. A. (2005) Critical review of host specificity and its coevolutionary implications in the fig/fig-wasp mutualism. Proc. Natl. Acad. Sci. USA 102: Suppl 1:6558-65 ""

  14. Molbo D., Machado C. A., Herre E. A., Keller L. (2004) Inbreeding and population structure in two pairs of cryptic fig wasp species. Mol. Ecol. 13: 1613-1623 ""

  15. Hey J., Machado C. A. (2003) The study of structured populations: a difficult and divided science has new hope. Nature Reviews Genetics 4: 535-543""

  16. Machado C. A., Hey J. (2003) The causes of phylogenetic conflict in a classic Drosophila species group. Proc. R. Soc. Lond. B 270: 1193-1202""

  17. Molbo, D., Machado, C. A., Sevenster, J. G., Keller L., Herre E. A. (2003) Cryptic species of fig-pollinating wasps: implications for the evolution of the fig-wasp mutualism, sex allocation, and precision of adaptation. Proc. Natl. Acad. Sci. USA 100: 5867-5872.""

  18. Machado C. A. (2003) Se cumple la regla de Hamilton? Investigación y Ciencia, November 2003""

  19. Shoemaker D. D., Machado C. A., Molbo D., Werren J. H., Windsor D. M., Herre E. A. (2002) The distribution of Wolbachia in fig wasps: correlation with host phylogeny, ecology and population structure. Proc. R. Soc. Lond. B 269: 2257-2267""

  20. Machado C. A., Ayala F. J. (2002) Sequence variation in the dihydrofolate reductase-thymidylate synthase (DHFR-TS) and trypanothione reductase (TR) genes of Trypanosoma cruzi. Mol. Biochem. Parasitol. 121: 33-47""

  21. Machado C. A., Kliman R. M., Markert J., Hey J. (2002) Inferring the history of speciation from multilocus DNA sequence data: the case of Drosophila pseudoobscura and close relatives. Mol. Biol. Evol. 19: 472-488""

  22. Noor M. A. F., Kliman R. M., Machado C. A. (2001) Evolutionary history of microsatellites in the obscura group of Drosophila. Mol. Biol. Evol. 18: 551-556""

  23. Machado C. A., Ayala F. J. (2001) Nucleotide sequences provide evidence of genetic exchange among distantly related lineages of Trypanosoma cruzi. Proc. Natl. Acad. Sci. USA 98: 7396-7401""

  24. Machado C. A, Jousselin E., Kjellberg F., Compton S. G., Herre E. A. (2001) Phylogenetic relationships, historical biogeography, and character evolution of fig pollinating wasps. Proc. R. Soc. Lond. B 268: 685-694""

  25. West S. A., Murray M. G., Machado C. A., Griffin A. S., Herre E. A. (2001) Testing Hamilton’s rule with competition between relatives. Nature 409: 510-513""

  26. Herre E. A, Machado C. A., West S. A. (2001) Selective regime and fig wasp sex ratios: towards sorting rigor from pseudo-rigor in tests of adaptation. In "Adaptationism and Optimality" pp. 191-218 (ed. S. Orzack & E. Sober) Cambridge University Press, New York, USA.

  27. Machado C. A., Antezana M. A. (2001) Diversity, Molecular Level. In "Encyclopedia of Biodiversity". S. Levin, Editor. Vol. 2, pp. 179-190. Academic Press, San Diego, USA.

  28. Herre E. A, Machado C. A., Bermingham E., Nason J. D., Windsor D. M., McCafferty S., Van Houten W., Bachmann K. (1996) Molecular phylogenies of figs and their pollinator wasps. J. Biogeogr. 23: 521-530""

  29. Machado C. A., Herre E. A, McCafferty S., Bermingham E. (1996) Molecular phylogenies of fig pollinating and non-pollinating wasps and the implications for the origin and evolution of the fig-fig wasp mutualism. J. Biogeogr. 23: 531-542""
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